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photosynthesis (BRENDA)

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EC Number Recommended Name Reaction BRENDA Pathway Name KEGG Pathway Name MetaCyc Pathway Name Reaction ID BRENDA Reaction ID KEGG Reaction ID MetaCyc Reaction ID SABIO-RK
show all sequences4.1.1.31 phosphoenolpyruvate carboxylase phosphoenolpyruvate + CO2 = phosphate + oxaloacetate photosynthesis Pyruvate metabolism,
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Carbon fixation pathways in prokaryotes,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
  BS1399 show the reaction diagram R00345 show the reaction diagram   150
show all sequences4.1.2.13 fructose-bisphosphate aldolase D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate photosynthesis,
glycolysis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics,
Biosynthesis of amino acids
gluconeogenesis II (Methanobacterium thermoautotrophicum),
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
1,3-propanediol biosynthesis (engineered),
sucrose biosynthesis I (from photosynthesis),
glycolysis V (Pyrococcus),
glycolysis III (from glucose),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
glycolysis IV (plant cytosol)
BR344 show the reaction diagram,
BS398846 show the reaction diagram
R01068 show the reaction diagram,
R01070 show the reaction diagram
F16ALDOLASE-RXN show the reaction diagram 1338,
3
show all sequences4.1.2.40 tagatose-bisphosphate aldolase D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate photosynthesis,
glycolysis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics,
Biosynthesis of amino acids
gluconeogenesis II (Methanobacterium thermoautotrophicum),
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
1,3-propanediol biosynthesis (engineered),
sucrose biosynthesis I (from photosynthesis),
glycolysis V (Pyrococcus),
glycolysis III (from glucose),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
glycolysis IV (plant cytosol)
BR344 show the reaction diagram,
BS398846 show the reaction diagram
R01068 show the reaction diagram,
R01070 show the reaction diagram
F16ALDOLASE-RXN show the reaction diagram 1338,
3
show all sequences5.1.3.1 ribulose-phosphate 3-epimerase D-ribulose 5-phosphate = D-xylulose 5-phosphate photosynthesis Pentose phosphate pathway,
Pentose and glucuronate interconversions,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Bifidobacterium shunt,
heterolactic fermentation,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)
BR184 show the reaction diagram R01529 show the reaction diagram RIBULP3EPIM-RXN show the reaction diagram 62
show all sequences2.2.1.1 transketolase D-xylulose 5-phosphate + D-erythrose 4-phosphate = D-fructose 6-phosphate + D-glyceraldehyde 3-phosphate photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Pentose phosphate pathway,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics,
Biosynthesis of amino acids
superpathway of glucose and xylose degradation,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)
BS320170 show the reaction diagram,
BS320221 show the reaction diagram,
BS434641 show the reaction diagram
R01067 show the reaction diagram,
R01830 show the reaction diagram
2TRANSKETO-RXN show the reaction diagram 1337
show all sequences2.2.1.3 formaldehyde transketolase D-xylulose 5-phosphate + D-erythrose 4-phosphate = D-fructose 6-phosphate + D-glyceraldehyde 3-phosphate photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Pentose phosphate pathway,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics,
Biosynthesis of amino acids
superpathway of glucose and xylose degradation,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle),
pentose phosphate pathway (partial)
BS320170 show the reaction diagram,
BS320221 show the reaction diagram,
BS434641 show the reaction diagram
R01067 show the reaction diagram,
R01830 show the reaction diagram
2TRANSKETO-RXN show the reaction diagram 1337
show all sequences2.7.1.19 phosphoribulokinase ATP + D-ribulose 5-phosphate = ADP + D-ribulose 1,5-bisphosphate photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
Calvin-Benson-Bassham cycle,
Rubisco shunt
BR47758 show the reaction diagram R01523 show the reaction diagram PHOSPHORIBULOKINASE-RXN show the reaction diagram 1692
show all sequences1.18.1.2 ferredoxin-NADP+ reductase 2 Reduced ferredoxin + NADP+ + H+ <=> 2 Oxidized ferredoxin + NADPH photosynthesis   photosynthesis light reactions   R01195 show the reaction diagram 1.18.1.2-RXN show the reaction diagram,
RXN-17897 show the reaction diagram
 
show all sequences1.18.1.2 ferredoxin-NADP+ reductase 2 reduced adrenodoxin + NADP+ + H+ = 2 oxidized adrenodoxin + NADPH photosynthesis   ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) BR50227 show the reaction diagram R10159 show the reaction diagram RXN-13685 show the reaction diagram  
show all sequences1.18.1.6 adrenodoxin-NADP+ reductase 2 reduced adrenodoxin + NADP+ + H+ = 2 oxidized adrenodoxin + NADPH photosynthesis   ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) BR50227 show the reaction diagram R10159 show the reaction diagram RXN-13685 show the reaction diagram  
show all sequences1.18.1.2 ferredoxin-NADP+ reductase 2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH photosynthesis     BR29163 show the reaction diagram      
show all sequences5.3.1.6 ribose-5-phosphate isomerase D-Ribose 5-phosphate = D-ribulose 5-phosphate pentose phosphate pathway,
photosynthesis
Pentose phosphate pathway,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Bifidobacterium shunt,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle)
BR237 show the reaction diagram R01056 show the reaction diagram RIB5PISOM-RXN show the reaction diagram 65
show all sequences5.3.1.9 glucose-6-phosphate isomerase D-Ribose 5-phosphate = D-ribulose 5-phosphate pentose phosphate pathway,
photosynthesis
Pentose phosphate pathway,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Bifidobacterium shunt,
Calvin-Benson-Bassham cycle,
Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
formaldehyde assimilation III (dihydroxyacetone cycle),
formaldehyde assimilation II (assimilatory RuMP Cycle)
BR237 show the reaction diagram R01056 show the reaction diagram RIB5PISOM-RXN show the reaction diagram 65
4.1.2.-   sedoheptulose 1,7-bisphosphate = glycerone phosphate + D-erythrose 4-phosphate photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
Calvin-Benson-Bassham cycle,
sedoheptulose bisphosphate bypass
BS1655 show the reaction diagram R01829 show the reaction diagram SEDOBISALDOL-RXN show the reaction diagram 45
show all sequences4.1.2.13 fructose-bisphosphate aldolase sedoheptulose 1,7-bisphosphate = glycerone phosphate + D-erythrose 4-phosphate photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
Calvin-Benson-Bassham cycle,
sedoheptulose bisphosphate bypass
BS1655 show the reaction diagram R01829 show the reaction diagram SEDOBISALDOL-RXN show the reaction diagram 45
show all sequences1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) D-glyceraldehyde 3-phosphate + phosphate + NADP+ = 3-phospho-D-glyceroyl phosphate + NADPH + H+ photosynthesis Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Calvin-Benson-Bassham cycle BR1125 show the reaction diagram,
BS424566 show the reaction diagram
R01063 show the reaction diagram 1.2.1.13-RXN show the reaction diagram,
GAPDHSYNEC-RXN show the reaction diagram
1335,
7845
show all sequences1.2.1.13 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) D-glyceraldehyde 3-phosphate + phosphate + NADP+ = 3-phospho-D-glyceroyl phosphate + NADPH + H+ photosynthesis Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Calvin-Benson-Bassham cycle BR1125 show the reaction diagram,
BS424566 show the reaction diagram
R01063 show the reaction diagram 1.2.1.13-RXN show the reaction diagram,
GAPDHSYNEC-RXN show the reaction diagram
1335,
7845
show all sequences1.2.1.59 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) D-glyceraldehyde 3-phosphate + phosphate + NADP+ = 3-phospho-D-glyceroyl phosphate + NADPH + H+ photosynthesis Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Calvin-Benson-Bassham cycle BR1125 show the reaction diagram,
BS424566 show the reaction diagram
R01063 show the reaction diagram 1.2.1.13-RXN show the reaction diagram,
GAPDHSYNEC-RXN show the reaction diagram
1335,
7845
show all sequences1.2.1.9 glyceraldehyde-3-phosphate dehydrogenase (NADP+) D-glyceraldehyde 3-phosphate + phosphate + NADP+ = 3-phospho-D-glyceroyl phosphate + NADPH + H+ photosynthesis Glycolysis / Gluconeogenesis,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Biosynthesis of secondary metabolites,
Microbial metabolism in diverse environments,
Biosynthesis of antibiotics,
Carbon metabolism,
Biosynthesis of amino acids
Calvin-Benson-Bassham cycle BR1125 show the reaction diagram,
BS424566 show the reaction diagram
R01063 show the reaction diagram 1.2.1.13-RXN show the reaction diagram,
GAPDHSYNEC-RXN show the reaction diagram
1335,
7845
show all sequences1.1.1.38 malate dehydrogenase (oxaloacetate-decarboxylating) (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+ gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation
Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
gluconeogenesis I,
C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type
BR29303 show the reaction diagram,
BS355850 show the reaction diagram
R00216 show the reaction diagram MALIC-NADP-RXN show the reaction diagram 142
show all sequences1.1.1.39 malate dehydrogenase (decarboxylating) (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+ gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation
Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
gluconeogenesis I,
C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type
BR29303 show the reaction diagram,
BS355850 show the reaction diagram
R00216 show the reaction diagram MALIC-NADP-RXN show the reaction diagram 142
show all sequences1.1.1.40 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+ gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation
Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
gluconeogenesis I,
C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type
BR29303 show the reaction diagram,
BS355850 show the reaction diagram
R00216 show the reaction diagram MALIC-NADP-RXN show the reaction diagram 142
show all sequences1.1.1.85 3-isopropylmalate dehydrogenase (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+ gluconeogenesis,
photosynthesis,
C4 and CAM-carbon fixation
Pyruvate metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
gluconeogenesis I,
C4 photosynthetic carbon assimilation cycle, PEPCK type,
C4 photosynthetic carbon assimilation cycle, NADP-ME type
BR29303 show the reaction diagram,
BS355850 show the reaction diagram
R00216 show the reaction diagram MALIC-NADP-RXN show the reaction diagram 142
show all sequences3.1.3.11 fructose-bisphosphatase D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate glycolysis,
photosynthesis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)
BR19198 show the reaction diagram R00762 show the reaction diagram,
R04780 show the reaction diagram
F16BDEPHOS-RXN show the reaction diagram 10378,
1117
show all sequences3.1.3.29 N-acylneuraminate-9-phosphatase D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate glycolysis,
photosynthesis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)
BR19198 show the reaction diagram R00762 show the reaction diagram,
R04780 show the reaction diagram
F16BDEPHOS-RXN show the reaction diagram 10378,
1117
show all sequences3.1.3.37 sedoheptulose-bisphosphatase D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate glycolysis,
photosynthesis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)
BR19198 show the reaction diagram R00762 show the reaction diagram,
R04780 show the reaction diagram
F16BDEPHOS-RXN show the reaction diagram 10378,
1117
show all sequences3.1.3.7 3'(2'),5'-bisphosphate nucleotidase D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate glycolysis,
photosynthesis
Methane metabolism,
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism,
Glycolysis / Gluconeogenesis,
Pentose phosphate pathway,
Fructose and mannose metabolism,
Biosynthesis of secondary metabolites,
Biosynthesis of antibiotics
gluconeogenesis I,
glycolysis I (from glucose 6-phosphate),
sucrose biosynthesis I (from photosynthesis),
glycolysis II (from fructose 6-phosphate),
gluconeogenesis III,
Calvin-Benson-Bassham cycle,
formaldehyde assimilation III (dihydroxyacetone cycle)
BR19198 show the reaction diagram R00762 show the reaction diagram,
R04780 show the reaction diagram
F16BDEPHOS-RXN show the reaction diagram 10378,
1117
show all sequences3.1.3.11 fructose-bisphosphatase sedoheptulose 1,7-bisphosphate + H2O = sedoheptulose 7-phosphate + phosphate photosynthesis,
pentose phosphate pathway
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
Calvin-Benson-Bassham cycle BR15940 show the reaction diagram R01845 show the reaction diagram SEDOHEPTULOSE-BISPHOSPHATASE-RXN show the reaction diagram 1923
show all sequences3.1.3.37 sedoheptulose-bisphosphatase sedoheptulose 1,7-bisphosphate + H2O = sedoheptulose 7-phosphate + phosphate photosynthesis,
pentose phosphate pathway
Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
Calvin-Benson-Bassham cycle BR15940 show the reaction diagram R01845 show the reaction diagram SEDOHEPTULOSE-BISPHOSPHATASE-RXN show the reaction diagram 1923
show all sequences4.1.1.39 ribulose-bisphosphate carboxylase 2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O photosynthesis Carbon fixation in photosynthetic organisms,
Metabolic pathways,
Microbial metabolism in diverse environments,
Carbon metabolism
nucleoside and nucleotide degradation (archaea),
Calvin-Benson-Bassham cycle,
Rubisco shunt
BR297 show the reaction diagram R00024 show the reaction diagram RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN show the reaction diagram 9130